To calculate the different features of the peptide, the calculator will apply the formulas described below:įor the peptide molecular weight calculator and molecular weight amino acid calculator, the following formula is applied: pH and a hydrophobicity calculator displayed in a plot. With the calculator and its easy use, peptide chemists can have access to a molecular weight peptide calculator and amino acid calculator, the isoelectric point, a peptide net charge calculator at neutral pH, the average hydrophilicity, the percentage of hydrophilic amino acids, the plot of the net charge vs. The calculator is one of the most useful tool for the peptide chemist to calculate peptide molecular weight and more. With the calculator, it’s also possible to add N-terminal and C-terminal modifications to your peptide among Acetyl, Biotynil, pyroglutamic amino acid and amide. Ratio of hydrophilic residues to total number of residues.To use our peptide calculator mass properties, enter the sequence or the amino acid using 1-letter or 3-letter amino acid codes and our calculator will provide the following physico-chemical properties of the sequence: How can our calculator be used to identify peptide properties? Additionally, the tool includes a hydrophobicity calculator, a net charge calculator at different pH, isoelectric point calculator and the hydrophilicity ratio. Our peptide calculator is a convenient tool for scientists as a molecular weight peptide calculator, which can be used as an amino acid calculator as well. Orders, Technical and Customer support: Shoji Co.What can our peptide calculator be used for? Orders, Technical and Customer support: +39 02 35980841 Orders and customer support : Switzerland, Austria To place an order, or for customer services, order processing or technical support please contact us on: Use this tool to interconvert three and one letter amino acid codesĪmino acid nomenclature Uncommon amino acids Peptide substituent abbreviations Amino acid properties Amino acid pKa and pKis Peptoid nomenclature External peptide resources Percentage totals are also given for each residue, and certain groups of residues, allowing comparison ofĬonvert three letter amino acid codes to single letters and vice versa Protein Stats allows the determination of the number of occurrences of each residue in a sequence. Peaks relative to the M peak of a peptide Use this tool to calculate the mass, elemental and amino acid composition, and ratio of M+1 and M+2 Mass, Elemental Composition, Amino Acid Composition, Isotope Ratio Data Sequences as well as help identify members of gene families BLAST can be used to infer functional and evolutionary relationships between BlastĬompares nucleotide or protein sequences to sequence databases and calculates the statistical The Basic Local Alignment Search Tool (BLAST) finds regions of local similarity between sequences. Whose masses may be affected by database conflicts, polymorphisms or splice variants Additionally PeptideMassĬan return the mass of peptides known to carry post-translational modifications, and highlight peptides Peptides and can also calculate theoretical isoelectric point and mass values. User-entered protein sequence with a chosen enzyme, and calculates the masses of the generated PeptideMass cleaves a protein sequence from the UniProt Knowledgebase (Swiss-Prot and TrEMBL), or a Polarity, refractivity, conformation and more. Predefined scales entered from the literature, including molecular weight, number of codons, bulkiness, An aminoĪcid scale is a numerical value assigned to each type of amino acid, and protscale allows analysis on 57 ProtScale allows analysis of the profile produced by an amino acid scale on a selected protein. Significance of sequence analysis results Shuffled sequences can be used to evaluate the Shuffle Protein randomly shuffles a protein sequence. Mass, isoelectric point, net charge, hydrophobicity and extinction coefficients: Pepdraw allows the calculation of various properties of a peptide from its sequence including length, Helical representation as if looking down the axis of the helix. Pepwheel draws a helical wheel diagram for a protein sequence. The peptide mass calculator allows the determination of the mass of any peptide from its sequence: Index and grand average of hydropathicity (GRAVY) Parameters include molecular weight, theoretical pI, amino acidĬomposition, atomic composition, extinction coefficient, estimated half-life, instability index, aliphatic Use ProtParam to determine physical and chemical parameters for a given protein in Swiss-Prot or The links on this page are to external peptide resources useful for calculating the properties of peptides

Isoelectric point calculator peptide